November 2017

Diploid Genotyping Low to Medium Coverage Ancient DNA – Part 1

OVERVIEW The overwhelming majority of published ancient DNA (aDNA) are pseudo-haploid genomes. This study focuses on the suitability and accuracy of these pseudo-haplodized aDNA genomes for various types of downstream analysis, such as those involving admixture allele frequency studies, as well as Identity-by-Decent (IBD) analyses and analyses using formal methods. The accuracy of pseudo-haploid aDNA …

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The Onge versus other Indian & SE Asian ASI proxies

DISCUSSION The Onge are an endangered relic population with only about 100 surviving members, who inhabit the Andaman Islands in the Indian Ocean. They are classified as Negritos, and are related to  Negritos from neighboring NE India, Burma, Cambodia, and Indonesia. The unifying physical characteristics of Negritos are short stature, curly hair, and dark pigmentation. …

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